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  5. LOC_Os11g13930.1

LOC_Os11g13930.1


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0083661 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0072608 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g13930.1
Cluster HCCA: Cluster_276

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00024p00085480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
AMTR_s00038p00027320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
AMTR_s00070p00154800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00099p00145100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
AMTR_s00119p00074870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00135p00085840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT1G14440 AtHB31, ZHD4, HB31 homeobox protein 31 0.04 Archaeplastida
AT1G75240 AtHB33, ZHD5, HB33 homeobox protein 33 0.03 Archaeplastida
AT2G02540 ZHD3, HB21, ATHB21, ZFHD4 homeobox protein 21 0.03 Archaeplastida
AT3G28920 HB34, ZHD9, AtHB34 homeobox protein 34 0.05 Archaeplastida
AT3G50890 ZHD7, HB28, AtHB28 homeobox protein 28 0.05 Archaeplastida
AT5G15210 ZHD8, ATHB30, ZFHD3, HB30 homeobox protein 30 0.04 Archaeplastida
AT5G65410 ZHD1, ZFHD2, HB25, ATHB25 homeobox protein 25 0.03 Archaeplastida
GSVIVT01009128001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01009721001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01011413001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01012772001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
Gb_15163 No alias transcription factor (zf-HD) 0.07 Archaeplastida
Gb_30271 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os03g50920.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
MA_19630g0030 No alias transcription factor (zf-HD) 0.04 Archaeplastida
MA_57426g0010 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Mp8g08190.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Pp3c19_20410V3.1 No alias homeobox protein 21 0.03 Archaeplastida
Pp3c1_15290V3.1 No alias homeobox protein 33 0.03 Archaeplastida
Pp3c2_21160V3.1 No alias homeobox protein 33 0.02 Archaeplastida
Smo59936 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Solyc01g102980.3.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc02g067320.3.1 No alias transcription factor (zf-HD) 0.04 Archaeplastida
Solyc02g085160.1.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
Solyc04g074990.3.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
Solyc04g080490.4.1 No alias transcription factor (zf-HD) 0.06 Archaeplastida
Zm00001e004112_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e008082_P001 No alias transcription factor (zf-HD) 0.07 Archaeplastida
Zm00001e009830_P001 No alias transcription factor (zf-HD) 0.11 Archaeplastida
Zm00001e015590_P001 No alias transcription factor (zf-HD) 0.09 Archaeplastida
Zm00001e018364_P001 No alias transcription factor (zf-HD) 0.07 Archaeplastida
Zm00001e021292_P003 No alias transcription factor (zf-HD) 0.06 Archaeplastida
Zm00001e022486_P001 No alias transcription factor (zf-HD) 0.08 Archaeplastida
Zm00001e023331_P001 No alias transcription factor (zf-HD) 0.07 Archaeplastida
Zm00001e034407_P001 No alias transcription factor (zf-HD) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 143 195
No external refs found!