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  5. AMTR_s00010p00263730

AMTR_s00010p00263730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.492

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0026020 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0024353 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00263730
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT4G04580 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01011163001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028403001 No alias Nutrient uptake.phosphorus assimilation.phosphate... 0.04 Archaeplastida
GSVIVT01029458001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_05469 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_17437 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_36677 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_40510 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os02g07170.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os06g45890.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_6619111g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c19_2940V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c20_7050V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_20290V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c4_23130V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c4_6870V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.04 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Zm00001e004125_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e005797_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e006632_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Zm00001e030364_P002 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e039024_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0017003 protein-heme linkage IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0017006 protein-tetrapyrrole linkage IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 23 71
IPR025756 Myb_CC_LHEQLE 142 171
No external refs found!