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  5. LOC_Os11g19030.1

LOC_Os11g19030.1


Description : transcription factor (FAR1)


Gene families : OG0009569 (Archaeplastida) Phylogenetic Tree(s): OG0009569_tree ,
OG_05_0009560 (LandPlants) Phylogenetic Tree(s): OG_05_0009560_tree ,
OG_06_0007137 (SeedPlants) Phylogenetic Tree(s): OG_06_0007137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g19030.1
Cluster HCCA: Cluster_306

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g41750.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os06g28170.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g32510.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g06770.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g06910.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 651 750
IPR004330 FAR1_DNA_bnd_dom 787 853
No external refs found!