1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g27400.1

LOC_Os11g27400.1


Description : no description available(sp|u5n4e3|nfh1_medtr : 191.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 112.0)


Gene families : OG0000905 (Archaeplastida) Phylogenetic Tree(s): OG0000905_tree ,
OG_05_0000646 (LandPlants) Phylogenetic Tree(s): OG_05_0000646_tree ,
OG_06_0000436 (SeedPlants) Phylogenetic Tree(s): OG_06_0000436_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g27400.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00150p00033570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AT4G19720 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.03 Archaeplastida
GSVIVT01001074001 No alias Class V chitinase OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_04927 No alias Class V chitinase OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04928 No alias Class V chitinase OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_04931 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.02 Archaeplastida
LOC_Os04g30770.1 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.04 Archaeplastida
MA_10427204g0010 No alias no description available(sp|a0a072ur65|cht5b_medtr :... 0.02 Archaeplastida
MA_126635g0010 No alias no description available(sp|a0a1b1j8z2|chit5_lotja :... 0.05 Archaeplastida
Mp8g05790.1 No alias no description available(sp|a0a1b1j8z2|chit5_lotja :... 0.04 Archaeplastida
Pp3c16_1070V3.1 No alias Glycosyl hydrolase family protein with chitinase insertion domain 0.02 Archaeplastida
Zm00001e021476_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e040723_P001 No alias Class V chitinase OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 52 381
No external refs found!