1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g30310.1

LOC_Os11g30310.1


Description : Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 385.5) & Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana (sp|q93za3|bbe13_arath : 330.0)


Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g30310.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AMTR_s00038p00164300 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AT1G26380 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G26420 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT1G30700 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G30730 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G30760 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT2G34810 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT4G20830 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT4G20860 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT5G44360 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_21185 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_21186 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Gb_21188 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Gb_24403 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Gb_24405 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_24415 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_24416 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_228933g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 Archaeplastida
MA_8334627g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_9511312g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Mp1g25840.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 Archaeplastida
Solyc02g022850.1.1 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g070070.1.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g070130.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g070160.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g070180.3.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g070200.3.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 Archaeplastida
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g079450.1.1 No alias Berberine bridge enzyme-like 23 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g079480.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc09g072660.4.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e021429_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.09 Archaeplastida
Zm00001e030684_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e035614_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.08 Archaeplastida
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Zm00001e042367_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.08 Archaeplastida
Zm00001e042369_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012951 BBE 475 534
IPR006094 Oxid_FAD_bind_N 82 221
No external refs found!