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  5. AMTR_s00011p00202020

AMTR_s00011p00202020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.70

Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001045 (SeedPlants) Phylogenetic Tree(s): OG_06_0001045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00202020
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT3G10900 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
AT5G66460 AtMAN7, MAN7 Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
GSVIVT01009746001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
GSVIVT01037214001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
GSVIVT01037215001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.05 Archaeplastida
Gb_08848 No alias endo-beta-1,4-mannanase 0.07 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
Gb_29706 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
Gb_33018 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
LOC_Os01g47400.1 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
LOC_Os05g25480.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_10432193g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_110162g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_111906g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_71720g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_894609g0010 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Mp8g13360.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Pp3c4_28130V3.1 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Smo234867 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.07 Archaeplastida
Solyc10g074920.2.1 No alias endo-beta-1,4-mannanase 0.06 Archaeplastida
Solyc12g013770.3.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Zm00001e019799_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e020240_P001 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 157 303
No external refs found!