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  5. LOC_Os11g43830.1

LOC_Os11g43830.1


Description : pectin methylesterase


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0083437 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0072377 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g43830.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
AMTR_s00007p00264470 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
AT1G69940 ATPPME1, PPME1 Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT2G21610 ATPE11, PE11 pectinesterase 11 0.03 Archaeplastida
AT3G17060 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT5G07410 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G07420 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G07430 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
Gb_38324 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os03g19610.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os11g45720.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g45730.1 No alias pectin methylesterase 0.06 Archaeplastida
MA_10428610g0010 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c16_19430V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c25_3840V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c25_760V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c5_12820V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c5_23400V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g079180.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc05g052120.4.1 No alias No annotation 0.08 Archaeplastida
Solyc12g099230.2.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e002891_P001 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e020795_P001 No alias pectin methylesterase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 74 245
No external refs found!