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  5. LOC_Os12g01400.1

LOC_Os12g01400.1


Description : Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica (sp|q2qyw1|cml25_orysj : 213.0)


Gene families : OG0002822 (Archaeplastida) Phylogenetic Tree(s): OG0002822_tree ,
OG_05_0001661 (LandPlants) Phylogenetic Tree(s): OG_05_0001661_tree ,
OG_06_0000816 (SeedPlants) Phylogenetic Tree(s): OG_06_0000816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g01400.1
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00067280 evm_27.TU.AmTr_v1... Putative calcium-binding protein CML19 OS=Oryza sativa... 0.05 Archaeplastida
AT1G76650 CML38 calmodulin-like 38 0.05 Archaeplastida
AT3G01830 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT3G50770 CML41 calmodulin-like 41 0.04 Archaeplastida
AT5G42380 CML39, CML37 calmodulin like 37 0.07 Archaeplastida
GSVIVT01010378001 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.03 Archaeplastida
GSVIVT01010379001 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.03 Archaeplastida
GSVIVT01010380001 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.03 Archaeplastida
GSVIVT01010383001 No alias Putative calcium-binding protein CML23 OS=Oryza sativa... 0.06 Archaeplastida
GSVIVT01010385001 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.09 Archaeplastida
GSVIVT01010387001 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.05 Archaeplastida
Gb_13855 No alias Probable calcium-binding protein CML41 OS=Arabidopsis... 0.05 Archaeplastida
Gb_13856 No alias Probable calcium-binding protein CML41 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os01g72530.1 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os01g72540.1 No alias Putative calcium-binding protein CML23 OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os01g72550.1 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.04 Archaeplastida
Solyc03g005040.1.1 No alias Probable calcium-binding protein CML31 OS=Oryza sativa... 0.04 Archaeplastida
Solyc11g071740.2.1 No alias Calcium-binding protein CML38 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g071750.2.1 No alias Calcium-binding protein CML37 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc11g071760.3.1 No alias Calcium-binding protein CML38 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e018580_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028302_P001 No alias Putative calcium-binding protein CML19 OS=Oryza sativa... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!