LOC_Os12g02380.1


Description : EF-P translation elongation factor


Gene families : OG0006447 (Archaeplastida) Phylogenetic Tree(s): OG0006447_tree ,
OG_05_0008592 (LandPlants) Phylogenetic Tree(s): OG_05_0008592_tree ,
OG_06_0008675 (SeedPlants) Phylogenetic Tree(s): OG_06_0008675_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g02380.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT3G08740 No alias elongation factor P (EF-P) family protein 0.08 Archaeplastida
Cre16.g691000 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
GSVIVT01030181001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Mp4g02120.1 No alias EF-P translation elongation factor 0.11 Archaeplastida
Pp3c23_18430V3.1 No alias elongation factor P (EF-P) family protein 0.05 Archaeplastida
Solyc10g075020.3.1 No alias EF-P translation elongation factor 0.1 Archaeplastida
Zm00001e039313_P003 No alias EF-P translation elongation factor 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR015365 Elong-fact-P_C 174 228
IPR013185 Transl_elong_KOW-like 48 104
IPR001059 Transl_elong_P/YeiP_cen 116 166
No external refs found!