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  5. LOC_Os12g02530.2

LOC_Os12g02530.2


Description : Root phototropism protein 2 OS=Arabidopsis thaliana (sp|q682s0|rpt2_arath : 367.0)


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000480 (LandPlants) Phylogenetic Tree(s): OG_05_0000480_tree ,
OG_06_0000628 (SeedPlants) Phylogenetic Tree(s): OG_06_0000628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g02530.2
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00237490 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.05 Archaeplastida
AMTR_s00077p00161250 evm_27.TU.AmTr_v1... Root phototropism protein 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00122p00139490 evm_27.TU.AmTr_v1... Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00137p00096710 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G67900 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT2G30520 RPT2 Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT3G44820 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
AT3G50840 No alias Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.04 Archaeplastida
AT5G17580 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
AT5G48130 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
GSVIVT01000146001 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000534001 No alias BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
GSVIVT01002274001 No alias BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01024542001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01035968001 No alias BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_00052 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_15614 No alias BTB/POZ domain-containing protein At1g03010... 0.02 Archaeplastida
LOC_Os02g35970.1 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 Archaeplastida
MA_10429476g0010 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.04 Archaeplastida
MA_90165g0010 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Pp3c4_9940V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 Archaeplastida
Smo156140 No alias BTB/POZ domain-containing protein At5g48800... 0.03 Archaeplastida
Solyc05g013570.3.1 No alias BTB/POZ domain-containing protein At1g67900... 0.03 Archaeplastida
Solyc05g051580.3.1 No alias BTB/POZ domain-containing protein DOT3 OS=Arabidopsis... 0.05 Archaeplastida
Solyc07g043130.3.1 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g048000.3.1 No alias BTB/POZ domain-containing protein At5g48130... 0.02 Archaeplastida
Solyc10g049660.2.1 No alias BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g066730.2.1 No alias BTB/POZ domain-containing protein At3g44820... 0.03 Archaeplastida
Zm00001e000726_P002 No alias BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e008748_P001 No alias Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e009259_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e014883_P001 No alias component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.04 Archaeplastida
Zm00001e029295_P001 No alias BTB/POZ domain-containing protein At1g30440... 0.03 Archaeplastida
Zm00001e039269_P001 No alias BTB/POZ domain-containing protein At3g08570... 0.02 Archaeplastida
Zm00001e039271_P001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR027356 NPH3_dom 171 427
No external refs found!