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  5. AMTR_s00011p00256600

AMTR_s00011p00256600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.174

No description available


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0000908 (LandPlants) Phylogenetic Tree(s): OG_05_0000908_tree ,
OG_06_0003873 (SeedPlants) Phylogenetic Tree(s): OG_06_0003873_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00256600
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00194530 evm_27.TU.AmTr_v1... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.03 Archaeplastida
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.03 Archaeplastida
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.02 Archaeplastida
Gb_04986 No alias carotenoid cleavage dioxygenase (CCD4) 0.04 Archaeplastida
Gb_33714 No alias carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.03 Archaeplastida
LOC_Os02g47510.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida
Smo75383 No alias Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.02 Archaeplastida
Smo80651 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
Solyc08g075480.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.07 Archaeplastida
Zm00001e015574_P001 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0008987 quinolinate synthetase A activity IEP Neighborhood
BP GO:0009435 NAD biosynthetic process IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
BP GO:0019674 NAD metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!