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  5. AMTR_s00011p00258490

AMTR_s00011p00258490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00011.184

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000388 (Archaeplastida) Phylogenetic Tree(s): OG0000388_tree ,
OG_05_0000719 (LandPlants) Phylogenetic Tree(s): OG_05_0000719_tree ,
OG_06_0001337 (SeedPlants) Phylogenetic Tree(s): OG_06_0001337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00011p00258490
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00134p00069640 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.05 Archaeplastida
AT1G31770 ABCG14 ATP-binding cassette 14 0.04 Archaeplastida
AT3G13220 ABCG26, WBC27 ABC-2 type transporter family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000057.107 No alias ABC transporter G family member 37 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01001660001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01014733001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01036869001 No alias Solute transport.primary active transport.ABC... 0.07 Archaeplastida
Gb_26434 No alias cytokinin transporter (ABCG14). subfamily ABCG transporter 0.04 Archaeplastida
Gb_31556 No alias subfamily ABCG transporter 0.01 Archaeplastida
Gb_38402 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os06g40550.1 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.04 Archaeplastida
MA_81274g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp3g19930.1 No alias ABC transporter G family member 26 OS=Arabidopsis... 0.03 Archaeplastida
Mp6g05900.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Pp3c17_18730V3.1 No alias ABC-2 type transporter family protein 0.03 Archaeplastida
Solyc04g006960.3.1 No alias cytokinin transporter (ABCG14). subfamily ABCG transporter 0.04 Archaeplastida
Solyc04g070970.4.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc07g065780.2.1 No alias ABC transporter G family member 26 OS=Arabidopsis... 0.04 Archaeplastida
Solyc12g013630.1.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Zm00001e037432_P001 No alias sporopollenin precursor exporter. subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e040163_P001 No alias cytokinin transporter (ABCG14). subfamily ABCG transporter 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016841 ammonia-lyase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 384 591
IPR003439 ABC_transporter-like 99 225
No external refs found!