Description : SGS3 stabilization factor of DNA methylation pathway
Gene families : OG0002118 (Archaeplastida) Phylogenetic Tree(s): OG0002118_tree ,
OG_05_0001921 (LandPlants) Phylogenetic Tree(s): OG_05_0001921_tree ,
OG_06_0004085 (SeedPlants) Phylogenetic Tree(s): OG_06_0004085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os12g09580.1 | |
Cluster | HCCA: Cluster_242 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_427366g0010 | No alias | Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis... | 0.02 | Archaeplastida | |
Zm00001e029397_P002 | No alias | SGS3 stabilization factor of DNA methylation pathway | 0.08 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0031047 | gene silencing by RNA | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000347 | THO complex | IEP | Neighborhood |
CC | GO:0000445 | THO complex part of transcription export complex | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
BP | GO:0006289 | nucleotide-excision repair | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0006479 | protein methylation | IEP | Neighborhood |
BP | GO:0007034 | vacuolar transport | IEP | Neighborhood |
MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0008276 | protein methyltransferase activity | IEP | Neighborhood |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Neighborhood |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016571 | histone methylation | IEP | Neighborhood |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Neighborhood |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
MF | GO:0042054 | histone methyltransferase activity | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
No external refs found! |