Coexpression cluster: Cluster_242 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005515 protein binding 25.0% (20/80) 2.04 0.0 9e-06
GO:0031047 gene silencing by RNA 2.5% (2/80) 6.72 0.000158 0.005274
GO:0016458 gene silencing 2.5% (2/80) 6.72 0.000158 0.005274
GO:0010605 negative regulation of macromolecule metabolic process 3.75% (3/80) 4.87 0.000152 0.007594
GO:0009892 negative regulation of metabolic process 3.75% (3/80) 4.87 0.000152 0.007594
GO:0048519 negative regulation of biological process 3.75% (3/80) 4.58 0.000276 0.007875
GO:0010629 negative regulation of gene expression 3.75% (3/80) 4.98 0.000121 0.012067
GO:0043414 macromolecule methylation 2.5% (2/80) 5.46 0.000954 0.023846
GO:0032259 methylation 2.5% (2/80) 5.04 0.001697 0.037719
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 1.25% (1/80) 8.04 0.003789 0.047361
GO:0000347 THO complex 1.25% (1/80) 8.04 0.003789 0.047361
GO:0000445 THO complex part of transcription export complex 1.25% (1/80) 8.04 0.003789 0.047361
GO:0061731 ribonucleoside-diphosphate reductase activity 1.25% (1/80) 8.04 0.003789 0.047361
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor 1.25% (1/80) 8.04 0.003789 0.047361
GO:0019783 ubiquitin-like protein-specific protease activity 2.5% (2/80) 4.31 0.004596 0.048376
GO:0036459 thiol-dependent ubiquitinyl hydrolase activity 2.5% (2/80) 4.31 0.004596 0.048376
GO:0101005 ubiquitinyl hydrolase activity 2.5% (2/80) 4.31 0.004596 0.048376
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_24 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_133 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_134 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_106 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_183 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_77 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_292 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_6 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_15 0.03 Archaeplastida Compare
Zea mays HCCA Cluster_27 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_49 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_96 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_122 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_141 0.045 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_296 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_309 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_115 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_100 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_1 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_10 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_39 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_41 0.054 Archaeplastida Compare
Oryza sativa HCCA Cluster_74 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_101 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_136 0.062 Archaeplastida Compare
Oryza sativa HCCA Cluster_143 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_153 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_192 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_193 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_200 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_203 0.072 Archaeplastida Compare
Oryza sativa HCCA Cluster_239 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_299 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_338 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_347 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_137 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_146 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_270 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_22 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_37 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_111 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_121 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_142 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_186 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.02 Archaeplastida Compare
Sequences (80) (download table)

InterPro Domains

GO Terms

Family Terms