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  5. LOC_Os12g10670.1

LOC_Os12g10670.1


Description : Protein STICHEL OS=Arabidopsis thaliana (sp|o64728|sti_arath : 626.0)


Gene families : OG0000633 (Archaeplastida) Phylogenetic Tree(s): OG0000633_tree ,
OG_05_0000427 (LandPlants) Phylogenetic Tree(s): OG_05_0000427_tree ,
OG_06_0001603 (SeedPlants) Phylogenetic Tree(s): OG_06_0001603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g10670.1
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00099080 evm_27.TU.AmTr_v1... Protein STICHEL-like 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01007580001 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021264001 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01023130001 No alias Protein STICHEL OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_11323 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_34437g0020 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_64150g0010 No alias Protein STICHEL-like 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g13040.1 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c9_18380V3.1 No alias AAA-type ATPase family protein 0.05 Archaeplastida
Solyc01g102810.3.1 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g072090.2.1 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e007784_P001 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e019639_P005 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e021817_P001 No alias No annotation 0.04 Archaeplastida
Zm00001e032180_P001 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Zm00001e039775_P001 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 631 739
No external refs found!