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  5. LOC_Os12g13020.1

LOC_Os12g13020.1


Description : no hits & (original description: none)


Gene families : OG0000817 (Archaeplastida) Phylogenetic Tree(s): OG0000817_tree ,
OG_05_0000485 (LandPlants) Phylogenetic Tree(s): OG_05_0000485_tree ,
OG_06_0000231 (SeedPlants) Phylogenetic Tree(s): OG_06_0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g13020.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g27660.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g35210.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g46100.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g55470.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os02g05570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g02960.1 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
LOC_Os04g16120.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g29160.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g16080.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g08180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g18220.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os10g26770.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g15750.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g28140.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g43160.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g47445.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g16110.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g26120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g27230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g31050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g35830.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g37190.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!