LOC_Os12g28177.1

Description : AAA-ATPase At3g28580 OS=Arabidopsis thaliana (sp|q9ljj7|aatp9_arath : 360.0)

Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0016234 (LandPlants) Phylogenetic Tree(s): OG_05_0016234_tree ,
OG_06_0014425 (SeedPlants) Phylogenetic Tree(s): OG_06_0014425_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os12g28177.1
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00267180	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00014p00111690	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.01	Archaeplastida
AMTR_s00019p00244450	evm_27.TU.AmTr_v1...	AAA-ATPase At3g28510 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00019p00244830	evm_27.TU.AmTr_v1...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.05	Archaeplastida
AMTR_s00036p00176790	evm_27.TU.AmTr_v1...	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.04	Archaeplastida
AT1G43910	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
AT2G18193	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Archaeplastida
AT3G28510	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Archaeplastida
AT3G28540	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT4G25835	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT5G17730	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Archaeplastida
AT5G40010	AATP1	AAA-ATPase 1	0.03	Archaeplastida
GSVIVT01001352001	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01008088001	No alias	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01023336001	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01029545001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01032552001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032554001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032556001	No alias	No description available	0.03	Archaeplastida
Gb_16063	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Gb_27546	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g19260.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	Archaeplastida
LOC_Os01g45450.1	No alias	AAA-ATPase At5g17740 OS=Arabidopsis thaliana...	0.06	Archaeplastida
LOC_Os03g38800.1	No alias	AAA-ATPase At5g17740 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os06g48250.1	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os12g28550.1	No alias	AAA-ATPase At5g40000 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_10430798g0010	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_216982g0010	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_23842g0010	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_344969g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_69227g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Mp7g18570.1	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Pp3c14_5870V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Pp3c1_35560V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Smo413949	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.02	Archaeplastida
Smo75451	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.02	Archaeplastida
Solyc02g062550.3.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	Archaeplastida
Solyc03g033790.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.04	Archaeplastida
Solyc03g033840.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	Archaeplastida
Solyc03g082640.3.1	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc10g007280.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.04	Archaeplastida
Zm00001e003357_P001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.06	Archaeplastida
Zm00001e003358_P001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.05	Archaeplastida
Zm00001e006040_P001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e007733_P001	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	Archaeplastida
Zm00001e011416_P001	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e012527_P001	No alias	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e013138_P001	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e027961_P001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e033043_P001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Zm00001e038158_P001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004556	alpha-amylase activity	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
BP	GO:0006022	aminoglycan metabolic process	IEP	Neighborhood
BP	GO:0006026	aminoglycan catabolic process	IEP	Neighborhood
BP	GO:0006030	chitin metabolic process	IEP	Neighborhood
BP	GO:0006032	chitin catabolic process	IEP	Neighborhood
BP	GO:0006040	amino sugar metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
MF	GO:0008168	methyltransferase activity	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Neighborhood
BP	GO:0017144	drug metabolic process	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0042737	drug catabolic process	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044248	cellular catabolic process	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
BP	GO:0046348	amino sugar catabolic process	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	30	122
IPR003959	ATPase_AAA_core	247	393

External Links

No external refs found!

LOC_Os12g28177.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation