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  5. LOC_Os12g32400.1

LOC_Os12g32400.1


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g32400.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G27740 RSL4 root hair defective 6-like 4 0.02 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10156436g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_78485g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp3g23300.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Smo404767 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Smo409967 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e018003_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 124 164
No external refs found!