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  5. LOC_Os12g36810.1

LOC_Os12g36810.1


Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 419.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 51.4)


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0000329 (LandPlants) Phylogenetic Tree(s): OG_05_0000329_tree ,
OG_06_0001972 (SeedPlants) Phylogenetic Tree(s): OG_06_0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g36810.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00258260 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AMTR_s00045p00118570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 Archaeplastida
AMTR_s00131p00115550 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
AT1G19170 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT2G23900 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT3G06770 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT3G16850 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT3G42950 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT4G23820 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01015044001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01019405001 No alias Probable polygalacturonase OS=Vitis vinifera 0.06 Archaeplastida
GSVIVT01026985001 No alias Probable polygalacturonase OS=Vitis vinifera 0.05 Archaeplastida
GSVIVT01028057001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01028246001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 Archaeplastida
Gb_06212 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Gb_23153 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Gb_28001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 Archaeplastida
MA_10436451g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g13870.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Pp3c19_14240V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c6_7160V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo124011 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 Archaeplastida
Solyc08g081480.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Solyc08g082170.4.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
Solyc09g075460.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
Zm00001e006249_P001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Zm00001e026646_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e027889_P004 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Zm00001e039674_P002 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 138 421
No external refs found!