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  5. LOC_Os12g37970.1

LOC_Os12g37970.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000113 (SeedPlants) Phylogenetic Tree(s): OG_06_0000113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g37970.1
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00110540 evm_27.TU.AmTr_v1... Transcription factor MYB80 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.03 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.03 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.04 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.07 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 Archaeplastida
AT5G58850 ATMYB119, MYB119 myb domain protein 119 0.02 Archaeplastida
GSVIVT01004464001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01011417001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01030708001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035459001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01037362001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os07g04700.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.04 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g43550.1 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_10432903g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_14452g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_230300g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_62361g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g079620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g053610.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g065100.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g076840.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e002919_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018193_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018391_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019501_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e026464_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e029601_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e030293_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e040155_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e040334_P001 No alias transcription factor (MYB) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 10 57
IPR001005 SANT/Myb 63 107
No external refs found!