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  5. LOC_Os12g39320.1

LOC_Os12g39320.1


Description : calcium-permeable channel (OSCA)


Gene families : OG0000175 (Archaeplastida) Phylogenetic Tree(s): OG0000175_tree ,
OG_05_0001215 (LandPlants) Phylogenetic Tree(s): OG_05_0001215_tree ,
OG_06_0001435 (SeedPlants) Phylogenetic Tree(s): OG_06_0001435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g39320.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00143150 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.05 Archaeplastida
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.05 Archaeplastida
AT1G30360 ERD4 Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
AT1G69450 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 Archaeplastida
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01000831001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
GSVIVT01011543001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 Archaeplastida
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.04 Archaeplastida
Gb_11287 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
LOC_Os03g47070.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
MA_10428484g0010 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Mp8g07950.1 No alias calcium-permeable channel (OSCA) 0.03 Archaeplastida
Pp3c10_14590V3.1 No alias ERD (early-responsive to dehydration stress) family protein 0.03 Archaeplastida
Pp3c17_22430V3.1 No alias Early-responsive to dehydration stress protein (ERD4) 0.03 Archaeplastida
Smo41460 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 Archaeplastida
Solyc02g036260.4.1 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Solyc02g081030.4.1 No alias calcium-permeable channel (OSCA) 0.05 Archaeplastida
Zm00001e003059_P001 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida
Zm00001e012117_P001 No alias calcium-permeable channel (OSCA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 174 329
IPR032880 Csc1_N 6 153
IPR003864 RSN1_7TM 342 606
No external refs found!