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  5. LOC_Os12g42910.1

LOC_Os12g42910.1


Description : cation:calcium cation exchanger (CCX)


Gene families : OG0000803 (Archaeplastida) Phylogenetic Tree(s): OG0000803_tree ,
OG_05_0010609 (LandPlants) Phylogenetic Tree(s): OG_05_0010609_tree ,
OG_06_0008075 (SeedPlants) Phylogenetic Tree(s): OG_06_0008075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g42910.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Gb_35920 No alias cation:calcium cation exchanger (CCX) 0.03 Archaeplastida
Gb_36337 No alias cation:calcium cation exchanger (CCX) 0.02 Archaeplastida
LOC_Os03g45370.1 No alias cation:calcium cation exchanger (CCX) 0.04 Archaeplastida
LOC_Os11g01580.1 No alias cation:calcium cation exchanger (CCX) 0.02 Archaeplastida
Pp3c3_880V3.1 No alias cation calcium exchanger 4 0.03 Archaeplastida
Pp3c3_884V3.1 No alias cation calcium exchanger 4 0.03 Archaeplastida
Smo404613 No alias Solute transport.carrier-mediated transport.CDF... 0.02 Archaeplastida
Zm00001e003285_P001 No alias cation:calcium cation exchanger (CCX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 422 577
IPR004837 NaCa_Exmemb 115 275
No external refs found!