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  5. LOC_Os12g44310.1

LOC_Os12g44310.1


Description : carotenoid cleavage dioxygenase (CCD1)


Gene families : OG0000267 (Archaeplastida) Phylogenetic Tree(s): OG0000267_tree ,
OG_05_0003817 (LandPlants) Phylogenetic Tree(s): OG_05_0003817_tree ,
OG_06_0004867 (SeedPlants) Phylogenetic Tree(s): OG_06_0004867_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g44310.1
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00253450 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
AMTR_s00022p00253640 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.04 Archaeplastida
Cpa|evm.model.tig00001128.6 No alias No description available 0.05 Archaeplastida
Cre03.g149650 No alias Carotenoid 9,10(9,10)-cleavage dioxygenase 1... 0.01 Archaeplastida
MA_10435932g0010 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 Archaeplastida
MA_210464g0010 No alias No annotation 0.04 Archaeplastida
MA_906445g0010 No alias No annotation 0.08 Archaeplastida
Pp3c22_6380V3.1 No alias carotenoid cleavage dioxygenase 1 0.05 Archaeplastida
Smo165469 No alias Secondary metabolism.terpenoids.terpenoid... 0.05 Archaeplastida
Solyc01g087260.4.1 No alias No annotation 0.05 Archaeplastida
Solyc08g075480.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.03 Archaeplastida
Solyc08g075490.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.04 Archaeplastida
Zm00001e038960_P002 No alias carotenoid cleavage dioxygenase (CCD1) 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 51 537
No external refs found!