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  5. Smo104859

Smo104859


Description : Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0023336 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo104859
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01021910001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
MA_14836g0010 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Archaeplastida
Mp2g26590.1 No alias component COI of jasmonic acid receptor complex 0.02 Archaeplastida
Mp6g02750.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Archaeplastida
Pp3c9_10120V3.1 No alias RNI-like superfamily protein 0.02 Archaeplastida
Solyc04g074980.3.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Archaeplastida
Zm00001e008324_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.03 Archaeplastida
Zm00001e028730_P001 No alias component COI of jasmonic acid receptor complex 0.02 Archaeplastida
Zm00001e040776_P001 No alias component TIR1/AFB of auxin receptor complex. component... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!