Smo104980

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo104980
Cluster	HCCA: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00040p00195730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00040p00196580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00056p00064760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00068p00102110	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.02	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.05	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00069p00141520	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00099p00122430	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
AMTR_s00129p00112550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.03	Archaeplastida
AT1G21910	DREB26	Integrase-type DNA-binding superfamily protein	0.07	Archaeplastida
AT1G22810	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.05	Archaeplastida
AT1G33760	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G36060	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G77640	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT2G36450	HRD	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G23220	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G25890	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G60490	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.04	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G19790	RAP2.11	related to AP2 11	0.02	Archaeplastida
AT5G25190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G51190	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01002195001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01002262001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015037001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015540001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01019860001	No alias	External stimuli response.temperature.ICE-CBF cold...	0.02	Archaeplastida
GSVIVT01021146001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01027770001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01032961001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Gb_10809	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_24048	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_24326	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_24329	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_34286	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g58420.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
LOC_Os02g13710.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g32040.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g43970.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os03g08460.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
LOC_Os04g32620.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46220.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g28350.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g49010.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os10g41130.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10031781g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_100724g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10082062g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10343854g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10370681g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_1037g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_10433094g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_115502g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_134453g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_19854g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_23271g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_288689g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_364562g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_4929994g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_5530g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_5629699g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_7168929g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
MA_88g0020	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_94228g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
MA_9565296g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_9588449g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_959784g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
Mp4g00380.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Mp6g08690.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c10_7030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_16660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c8_7340V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g090340.3.1	No alias	Ethylene-responsive transcription factor 13...	0.02	Archaeplastida
Solyc01g108240.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc02g090770.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g005500.1.1	No alias	transcription factor (ERF). transcription factor (DREB)	0.03	Archaeplastida
Solyc03g093610.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc03g118190.4.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc03g124110.2.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.03	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc05g052410.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc06g054630.3.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc06g065820.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g066540.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc08g007820.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc08g007830.1.1	No alias	Dehydration-responsive element-binding protein 1F...	0.02	Archaeplastida
Solyc09g066350.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g091950.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc10g050960.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc11g042560.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e001139_P001	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Archaeplastida
Zm00001e002358_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e015327_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e015968_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e027350_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e029041_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e031438_P002	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Archaeplastida
Zm00001e034242_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e038819_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.08	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041532_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
BP	GO:0006090	pyruvate metabolic process	IEP	Neighborhood
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Neighborhood
BP	GO:0006096	glycolytic process	IEP	Neighborhood
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Neighborhood
BP	GO:0006733	oxidoreduction coenzyme metabolic process	IEP	Neighborhood
BP	GO:0006754	ATP biosynthetic process	IEP	Neighborhood
BP	GO:0006757	ATP generation from ADP	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009165	nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0009166	nucleotide catabolic process	IEP	Neighborhood
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Neighborhood
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Neighborhood
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Neighborhood
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Neighborhood
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0016052	carbohydrate catabolic process	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
BP	GO:0042866	pyruvate biosynthetic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
BP	GO:0046031	ADP metabolic process	IEP	Neighborhood
BP	GO:0046034	ATP metabolic process	IEP	Neighborhood
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
BP	GO:0046939	nucleotide phosphorylation	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Neighborhood
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	131	180

External Links

No external refs found!

Smo104980

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation