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  5. Smo107503

Smo107503


Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor


Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0000053 (LandPlants) Phylogenetic Tree(s): OG_05_0000053_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo107503
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G77570 No alias Winged helix-turn-helix transcription repressor DNA-binding 0.02 Archaeplastida
AT2G26150 HSFA2, ATHSFA2 heat shock transcription factor A2 0.15 Archaeplastida
AT3G51910 AT-HSFA7A, HSFA7A heat shock transcription factor A7A 0.06 Archaeplastida
AT3G63350 HSFA7B, AT-HSFA7B winged-helix DNA-binding transcription factor family protein 0.08 Archaeplastida
AT5G03720 HSFA3, AT-HSFA3 heat shock transcription factor A3 0.03 Archaeplastida
GSVIVT01003118001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.08 Archaeplastida
GSVIVT01019829001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.06 Archaeplastida
GSVIVT01033781001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 Archaeplastida
GSVIVT01035385001 No alias RNA biosynthesis.transcriptional activation.HSF (heat... 0.09 Archaeplastida
Gb_00558 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.02 Archaeplastida
Gb_11758 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.09 Archaeplastida
Gb_16343 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.04 Archaeplastida
Gb_19891 No alias transcription factor (HSF) 0.08 Archaeplastida
LOC_Os01g43590.1 No alias transcription factor (HSF) 0.03 Archaeplastida
LOC_Os03g06630.1 No alias transcription factor (HSF) 0.03 Archaeplastida
LOC_Os03g25120.1 No alias transcription factor (HSF) 0.02 Archaeplastida
LOC_Os03g53340.2 No alias transcription factor (HSF) 0.07 Archaeplastida
LOC_Os04g48030.1 No alias transcription factor (HSF) 0.07 Archaeplastida
LOC_Os06g36930.1 No alias transcription factor (HSF) 0.05 Archaeplastida
LOC_Os08g43334.1 No alias transcription factor (HSF) 0.03 Archaeplastida
LOC_Os09g35790.1 No alias transcription factor (HSF) 0.04 Archaeplastida
LOC_Os10g28340.1 No alias transcription factor (HSF) 0.12 Archaeplastida
Solyc03g097120.3.1 No alias transcription factor (HSF). transcriptional regulator (HsfA1) 0.03 Archaeplastida
Solyc06g053960.3.1 No alias transcription factor (HSF) 0.02 Archaeplastida
Solyc07g040680.3.1 No alias transcription factor (HSF) 0.02 Archaeplastida
Solyc08g080540.3.1 No alias transcription factor (HSF) 0.05 Archaeplastida
Solyc09g065660.4.1 No alias transcription factor (HSF) 0.04 Archaeplastida
Zm00001e000467_P001 No alias transcription factor (HSF) 0.08 Archaeplastida
Zm00001e000890_P002 No alias transcription factor (HSF) 0.03 Archaeplastida
Zm00001e003755_P002 No alias transcription factor (HSF) 0.08 Archaeplastida
Zm00001e004752_P001 No alias transcription factor (HSF) 0.12 Archaeplastida
Zm00001e024268_P001 No alias transcription factor (HSF) 0.08 Archaeplastida
Zm00001e037165_P002 No alias transcription factor (HSF) 0.11 Archaeplastida
Zm00001e041441_P001 No alias transcription factor (HSF) 0.1 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 26 115
No external refs found!