1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00012p00252040

AMTR_s00012p00252040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.258

Description : Thaumatin-like protein OS=Oryza sativa subsp. japonica


Gene families : OG0000084 (Archaeplastida) Phylogenetic Tree(s): OG0000084_tree ,
OG_05_0011385 (LandPlants) Phylogenetic Tree(s): OG_05_0011385_tree ,
OG_06_0011431 (SeedPlants) Phylogenetic Tree(s): OG_06_0011431_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00252040
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00157270 evm_27.TU.AmTr_v1... Osmotin-like protein OS=Solanum lycopersicum 0.03 Archaeplastida
AT1G75030 ATLP-3, TLP-3 thaumatin-like protein 3 0.03 Archaeplastida
AT4G24180 TLP1, ATTLP1 THAUMATIN-LIKE PROTEIN 1 0.02 Archaeplastida
AT4G36010 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Archaeplastida
AT5G40020 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Archaeplastida
Cre02.g102300 No alias No description available 0.01 Archaeplastida
GSVIVT01008423001 No alias Thaumatin-like protein OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01032051001 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_07677 No alias no description available(sp|q8h994|crj33_cryja : 260.0) 0.03 Archaeplastida
Gb_07678 No alias no description available(sp|q8h994|crj33_cryja : 355.0) 0.02 Archaeplastida
Gb_19743 No alias no description available(sp|a4pbq1|crj38_cryja : 302.0) 0.02 Archaeplastida
Gb_19746 No alias no description available(sp|q5dwg2|crj34_cryja : 239.0) 0.02 Archaeplastida
Gb_19748 No alias no description available(sp|q4w6c7|crj37_cryja : 309.0) 0.02 Archaeplastida
Gb_19750 No alias no description available(sp|a4pbq1|crj38_cryja : 266.0) 0.02 Archaeplastida
Gb_25722 No alias no description available(sp|q5dwg1|crj35_cryja : 343.0) 0.04 Archaeplastida
Gb_35027 No alias no description available(sp|q5dwg1|crj35_cryja : 333.0) 0.02 Archaeplastida
LOC_Os03g14050.1 No alias no description available(sp|q9ff29|pr5k_arath : 238.0) 0.03 Archaeplastida
LOC_Os03g45960.1 No alias Zeamatin OS=Zea mays (sp|p33679|zeam_maize : 280.0) 0.02 Archaeplastida
LOC_Os06g47600.1 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g50240.1 No alias no description available(sp|q9ff29|pr5k_arath : 221.0) 0.02 Archaeplastida
LOC_Os10g05600.1 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g47944.1 No alias Thaumatin-like protein OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10432704g0010 No alias no description available(sp|q5dwg1|crj35_cryja : 237.0) 0.03 Archaeplastida
MA_132199g0010 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_133779g0010 No alias no description available(sp|q5dwg2|crj34_cryja : 240.0) 0.03 Archaeplastida
MA_3795g0010 No alias no description available(sp|q5dwg2|crj34_cryja : 225.0) 0.01 Archaeplastida
Smo236128 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana 0.06 Archaeplastida
Solyc04g079890.4.1 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc08g080640.2.1 No alias Protein NP24 OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc12g056390.1.1 No alias Pathogenesis-related protein R major form OS=Nicotiana... 0.02 Archaeplastida
Zm00001e004789_P001 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e008742_P001 No alias Thaumatin-like protein 1a OS=Malus domestica... 0.03 Archaeplastida
Zm00001e013093_P001 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e020930_P001 No alias Thaumatin-like protein OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e033094_P001 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e037227_P002 No alias no description available(sp|q9ff29|pr5k_arath : 224.0) 0.02 Archaeplastida
Zm00001e040442_P003 No alias Thaumatin-like protein 1a OS=Malus domestica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001938 Thaumatin 32 245
No external refs found!