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  5. Smo11063

Smo11063


Description : Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0011236 (LandPlants) Phylogenetic Tree(s): OG_05_0011236_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo11063
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.03 Archaeplastida
Cre08.g358250 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.05 Archaeplastida
LOC_Os08g04400.1 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 Archaeplastida
LOC_Os09g24520.2 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.04 Archaeplastida
LOC_Os10g30760.1 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 Archaeplastida
MA_20168g0010 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 Archaeplastida
MA_82595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
Pp3c6_23550V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Archaeplastida
Smo26786 No alias Pentatricopeptide repeat-containing protein ELI1,... 0.04 Archaeplastida
Solyc07g006990.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
Solyc07g009220.2.1 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 112 136
No external refs found!