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  5. Smo111808

Smo111808


Description : Cytoskeleton.cp-actin-dependent plastid movement.PMIR cp-actin stability co-factor


Gene families : OG0002266 (Archaeplastida) Phylogenetic Tree(s): OG0002266_tree ,
OG_05_0001684 (LandPlants) Phylogenetic Tree(s): OG_05_0001684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo111808
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00039020 evm_27.TU.AmTr_v1... Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.03 Archaeplastida
AT5G20610 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 Archaeplastida
GSVIVT01015144001 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.03 Archaeplastida
Pp3c11_21020V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c12_9200V3.1 No alias No annotation 0.02 Archaeplastida
Zm00001e028177_P001 No alias actin stability co-factor (PMIR) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!