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  5. Smo111910

Smo111910


Description : Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0034067 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo111910
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001154.31 No alias No description available 0.01 Archaeplastida
Pp3c2_12230V3.1 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Archaeplastida
Smo130420 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.03 Archaeplastida
Smo26969 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida
Solyc02g094125.1.1 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0010011 auxin binding IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 343 365
No external refs found!