AT1G32530

Description : RING/U-box superfamily protein

Gene families : OG0001766 (Archaeplastida) Phylogenetic Tree(s): OG0001766_tree ,
OG_05_0001442 (LandPlants) Phylogenetic Tree(s): OG_05_0001442_tree ,
OG_06_0001635 (SeedPlants) Phylogenetic Tree(s): OG_06_0001635_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G32530
Cluster	HCCA: Cluster_281

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os05g04950.1	No alias	Putative E3 ubiquitin-protein ligase RF298...	0.02	Archaeplastida
Pp3c25_14470V3.1	No alias	RING/U-box superfamily protein	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006486	protein glycosylation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006914	autophagy	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009608	response to symbiont	None	Extended
BP	GO:0009610	response to symbiotic fungus	RCA	Interproscan
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051704	multi-organism process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Neighborhood
BP	GO:0000910	cytokinesis	IEP	Neighborhood
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
MF	GO:0003841	1-acylglycerol-3-phosphate O-acyltransferase activity	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Neighborhood
MF	GO:0004022	alcohol dehydrogenase (NAD) activity	IEP	Neighborhood
MF	GO:0004034	aldose 1-epimerase activity	IEP	Neighborhood
MF	GO:0004103	choline kinase activity	IEP	Neighborhood
MF	GO:0004416	hydroxyacylglutathione hydrolase activity	IEP	Neighborhood
MF	GO:0004475	mannose-1-phosphate guanylyltransferase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Neighborhood
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005459	UDP-galactose transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005460	UDP-glucose transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006007	glucose catabolic process	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006560	proline metabolic process	IEP	Neighborhood
BP	GO:0006561	proline biosynthetic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006970	response to osmotic stress	IEP	Neighborhood
BP	GO:0006971	hypotonic response	IEP	Neighborhood
BP	GO:0006972	hyperosmotic response	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0007112	male meiosis cytokinesis	IEP	Neighborhood
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	Neighborhood
MF	GO:0008905	mannose-phosphate guanylyltransferase activity	IEP	Neighborhood
CC	GO:0009368	endopeptidase Clp complex	IEP	Neighborhood
BP	GO:0009408	response to heat	IEP	Neighborhood
BP	GO:0009414	response to water deprivation	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009555	pollen development	IEP	Neighborhood
BP	GO:0009590	detection of gravity	IEP	Neighborhood
BP	GO:0009595	detection of biotic stimulus	IEP	Neighborhood
BP	GO:0009636	response to toxic substance	IEP	Neighborhood
BP	GO:0009644	response to high light intensity	IEP	Neighborhood
BP	GO:0009651	response to salt stress	IEP	Neighborhood
BP	GO:0009696	salicylic acid metabolic process	IEP	Neighborhood
BP	GO:0009697	salicylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009719	response to endogenous stimulus	IEP	Neighborhood
BP	GO:0009725	response to hormone	IEP	Neighborhood
BP	GO:0009733	response to auxin	IEP	Neighborhood
BP	GO:0009737	response to abscisic acid	IEP	Neighborhood
BP	GO:0009751	response to salicylic acid	IEP	Neighborhood
BP	GO:0009753	response to jasmonic acid	IEP	Neighborhood
CC	GO:0009840	chloroplastic endopeptidase Clp complex	IEP	Neighborhood
BP	GO:0009861	jasmonic acid and ethylene-dependent systemic resistance	IEP	Neighborhood
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009868	jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009959	negative gravitropism	IEP	Neighborhood
BP	GO:0010031	circumnutation	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
BP	GO:0010193	response to ozone	IEP	Neighborhood
BP	GO:0010200	response to chitin	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015692	lead ion transport	IEP	Neighborhood
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0015850	organic hydroxy compound transport	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
BP	GO:0016482	cytosolic transport	IEP	Neighborhood
BP	GO:0016485	protein processing	IEP	Neighborhood
CC	GO:0016602	CCAAT-binding factor complex	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
BP	GO:0018958	phenol-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019320	hexose catabolic process	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0019852	L-ascorbic acid metabolic process	IEP	Neighborhood
BP	GO:0019853	L-ascorbic acid biosynthetic process	IEP	Neighborhood
BP	GO:0022403	cell cycle phase	IEP	Neighborhood
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	Neighborhood
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0031348	negative regulation of defense response	IEP	Neighborhood
MF	GO:0031490	chromatin DNA binding	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0033206	meiotic cytokinesis	IEP	Neighborhood
BP	GO:0033542	fatty acid beta-oxidation, unsaturated, even number	IEP	Neighborhood
BP	GO:0033993	response to lipid	IEP	Neighborhood
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Neighborhood
MF	GO:0035064	methylated histone binding	IEP	Neighborhood
BP	GO:0035265	organ growth	IEP	Neighborhood
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Neighborhood
MF	GO:0042171	lysophosphatidic acid acyltransferase activity	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
BP	GO:0042539	hypotonic salinity response	IEP	Neighborhood
BP	GO:0042542	response to hydrogen peroxide	IEP	Neighborhood
BP	GO:0042761	very long-chain fatty acid biosynthetic process	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043407	negative regulation of MAP kinase activity	IEP	Neighborhood
BP	GO:0043409	negative regulation of MAPK cascade	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044848	biological phase	IEP	Neighborhood
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0046365	monosaccharide catabolic process	IEP	Neighborhood
BP	GO:0046677	response to antibiotic	IEP	Neighborhood
BP	GO:0046864	isoprenoid transport	IEP	Neighborhood
BP	GO:0046865	terpenoid transport	IEP	Neighborhood
BP	GO:0048229	gametophyte development	IEP	Neighborhood
BP	GO:0048585	negative regulation of response to stimulus	IEP	Neighborhood
MF	GO:0050113	inositol oxygenase activity	IEP	Neighborhood
MF	GO:0050313	sulfur dioxygenase activity	IEP	Neighborhood
BP	GO:0050879	multicellular organismal movement	IEP	Neighborhood
BP	GO:0051322	anaphase	IEP	Neighborhood
BP	GO:0051606	detection of stimulus	IEP	Neighborhood
MF	GO:0051990	(R)-2-hydroxyglutarate dehydrogenase activity	IEP	Neighborhood
BP	GO:0060359	response to ammonium ion	IEP	Neighborhood
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	Neighborhood
BP	GO:0070370	cellular heat acclimation	IEP	Neighborhood
MF	GO:0070568	guanylyltransferase activity	IEP	Neighborhood
MF	GO:0071617	lysophospholipid acyltransferase activity	IEP	Neighborhood
MF	GO:0080023	3R-hydroxyacyl-CoA dehydratase activity	IEP	Neighborhood
BP	GO:0080168	abscisic acid transport	IEP	Neighborhood
BP	GO:0097305	response to alcohol	IEP	Neighborhood
MF	GO:0140030	modification-dependent protein binding	IEP	Neighborhood
MF	GO:0140034	methylation-dependent protein binding	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood
BP	GO:2000904	regulation of starch metabolic process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G32530

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation