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  5. AMTR_s00012p00258400

AMTR_s00012p00258400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.307

No description available


Gene families : OG0000262 (Archaeplastida) Phylogenetic Tree(s): OG0000262_tree ,
OG_05_0000529 (LandPlants) Phylogenetic Tree(s): OG_05_0000529_tree ,
OG_06_0000300 (SeedPlants) Phylogenetic Tree(s): OG_06_0000300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00258400
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT4G00295 No alias No description available 0.03 Archaeplastida
AT4G11350 No alias Protein of unknown function (DUF604) 0.02 Archaeplastida
AT4G23490 No alias Protein of unknown function (DUF604) 0.02 Archaeplastida
AT5G12460 No alias Protein of unknown function (DUF604) 0.02 Archaeplastida
GSVIVT01034119001 No alias No description available 0.02 Archaeplastida
Gb_04629 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_31866 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_36870 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g45700.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g03270.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g16290.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_7477879g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c9_2080V3.1 No alias Protein of unknown function (DUF604) 0.02 Archaeplastida
Solyc05g046110.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g075560.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g065390.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g072700.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc12g005730.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e012539_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021777_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041410_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006740 DUF604 264 517
No external refs found!