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  5. Smo124011

Smo124011


Description : Probable polygalacturonase OS=Vitis vinifera


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0000329 (LandPlants) Phylogenetic Tree(s): OG_05_0000329_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo124011
Cluster HCCA: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g15690.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
LOC_Os12g36810.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
MA_98717g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Pp3c24_2470V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Solyc07g042160.3.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 132 415
No external refs found!