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  5. Smo130556

Smo130556


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo130556
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00109210 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT3G11280 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
LOC_Os10g41260.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_10432875g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_10432875g0030 No alias transcription factor (MYB-related) 0.09 Archaeplastida
Pp3c15_23090V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Pp3c15_23110V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Pp3c9_19090V3.1 No alias myb-like transcription factor family protein 0.04 Archaeplastida
Solyc03g119740.3.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc04g080500.3.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc06g076770.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Solyc12g044610.2.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e002313_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e025946_P002 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e040277_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 85 129
No external refs found!