1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00013p00097650

AMTR_s00013p00097650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.47

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00097650
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.03 Archaeplastida
AT3G30842 ATPDR10, PDR10 pleiotropic drug resistance 10 0.02 Archaeplastida
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.03 Archaeplastida
Cre12.g540650 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01034745001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01035715001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
LOC_Os02g32690.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os11g37700.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10427683g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10433422g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_117094g0010 No alias no description available(sp|h6ws94|pdr1_pethy : 134.0) 0.03 Archaeplastida
MA_12965g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_949447g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g07030.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp2g21340.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c22_9340V3.1 No alias pleiotropic drug resistance 12 0.02 Archaeplastida
Pp3c5_23360V3.1 No alias pleiotropic drug resistance 7 0.02 Archaeplastida
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Archaeplastida
Solyc05g055330.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc06g065670.4.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Solyc06g076930.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc09g091670.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc12g019620.2.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc12g019640.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e016714_P002 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e030669_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 598 726
IPR013581 PDR_assoc 402 466
IPR013525 ABC_2_trans 871 1085
IPR013525 ABC_2_trans 185 397
No external refs found!