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  5. Smo133320

Smo133320


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0009965 (LandPlants) Phylogenetic Tree(s): OG_05_0009965_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo133320
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Gb_13599 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
Gb_33061 No alias RNA editing factor (MEF3) 0.03 Archaeplastida
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
Gb_36168 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
LOC_Os09g24520.2 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.02 Archaeplastida
LOC_Os11g01836.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 Archaeplastida
MA_104937g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.02 Archaeplastida
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 Archaeplastida
MA_9258g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
MA_9384g0020 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.02 Archaeplastida
Smo118039 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
Smo118817 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 Archaeplastida
Smo127010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Smo27025 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.04 Archaeplastida
Smo70490 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 Archaeplastida
Smo80739 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Solyc03g115800.1.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Zm00001e011417_P001 No alias RNA editing factor (CRR28) 0.04 Archaeplastida
Zm00001e022253_P001 No alias Pentatricopeptide repeat-containing protein At1g59720,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008565 protein transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 36 84
No external refs found!