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  5. Smo137981

Smo137981


Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin I/II complex.CAP-E2/SMC2 component


Gene families : OG0004321 (Archaeplastida) Phylogenetic Tree(s): OG0004321_tree ,
OG_05_0004824 (LandPlants) Phylogenetic Tree(s): OG_05_0004824_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo137981
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00193070 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromatin... 0.05 Archaeplastida
AT3G47460 ATSMC2 Structural maintenance of chromosomes (SMC) family protein 0.04 Archaeplastida
AT5G62410 TTN3, ATSMC4,... structural maintenance of chromosomes 2 0.09 Archaeplastida
Cpa|evm.model.tig00000615.55 No alias Cell cycle.mitosis and meiosis.chromatin... 0.01 Archaeplastida
Cre02.g086650 No alias Cell cycle.mitosis and meiosis.chromatin... 0.02 Archaeplastida
GSVIVT01018715001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.06 Archaeplastida
Gb_17843 No alias component CAP-E2/SMC2 of condensin I/II complex 0.07 Archaeplastida
LOC_Os01g67740.1 No alias component CAP-E2/SMC2 of condensin I/II complex 0.03 Archaeplastida
MA_15346g0010 No alias component CAP-E2/SMC2 of condensin I/II complex 0.04 Archaeplastida
Mp1g04330.1 No alias component CAP-E2/SMC2 of condensin I/II complex 0.06 Archaeplastida
Pp3c13_8840V3.1 No alias structural maintenance of chromosomes 2 0.04 Archaeplastida
Solyc03g093250.2.1 No alias component CAP-E2/SMC2 of condensin I/II complex 0.03 Archaeplastida
Solyc03g093260.3.1 No alias component CAP-E2/SMC2 of condensin I/II complex 0.04 Archaeplastida
Zm00001e018930_P001 No alias component CAP-E2/SMC2 of condensin I/II complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR003395 RecF/RecN/SMC_N 2 1161
No external refs found!