Smo139200

Description : DNA-directed RNA polymerase subunit beta OS=Marchantia polymorpha

Gene families : OG0001479 (Archaeplastida) Phylogenetic Tree(s): OG0001479_tree ,
OG_05_0001081 (LandPlants) Phylogenetic Tree(s): OG_05_0001081_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo139200
Cluster	HCCA: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
Mp1g13170.1	No alias	DNA-directed RNA polymerase subunit beta OS=Marchantia...	0.02	Archaeplastida
Smo236845	No alias	RNA biosynthesis.organelle machineries.RNA polymerase...	0.02	Archaeplastida
Smo237022	No alias	RNA biosynthesis.organelle machineries.RNA polymerase...	0.02	Archaeplastida
Smo237023	No alias	RNA biosynthesis.organelle machineries.RNA polymerase...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Neighborhood
MF	GO:0008170	N-methyltransferase activity	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
MF	GO:0008276	protein methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0016125	sterol metabolic process	IEP	Neighborhood
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0042054	histone methyltransferase activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007642	RNA_pol_Rpb2_2	117	198

External Links

No external refs found!