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  5. Smo140818

Smo140818


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo140818
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 ATARFA1F, ARFA1F ADP-ribosylation factor A1F 0.04 Archaeplastida
AT1G70490 ARFA1D, ATARFA1D Ras-related small GTP-binding family protein 0.04 Archaeplastida
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.04 Archaeplastida
Cre12.g535900 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
LOC_Os02g03610.1 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os03g59740.1 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os08g15040.1 No alias ARF-GTPase 0.05 Archaeplastida
Mp3g13920.1 No alias ARF-GTPase 0.02 Archaeplastida
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.02 Archaeplastida
Pp3c4_20601V3.1 No alias ADP-ribosylation factor A1B 0.02 Archaeplastida
Solyc07g006640.3.1 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e021566_P001 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e023300_P004 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e025541_P003 No alias ARF-GTPase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!