Smo141195

Description : Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG11 multifunctional scaffold component

Gene families : OG0005689 (Archaeplastida) Phylogenetic Tree(s): OG0005689_tree ,
OG_05_0034166 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo141195
Cluster	HCCA: Cluster_193

Target	Alias	Description	ECC score	Gene Family Method	Actions
Smo79145	No alias	Vesicle trafficking.autophagosome formation.ATG1-13...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006914	autophagy	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0061919	process utilizing autophagic mechanism	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0071985	multivesicular body sorting pathway	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007240	Atg17	127	354

External Links

No external refs found!

Smo141195

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation