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Heatmap: Cluster_193 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.28 -0.84 -0.77 -0.36 -0.77 -0.55 -0.85 -0.34 -0.37 -0.01 0.02 -0.0 -0.14 -0.86 0.24 -0.18 -0.62 -0.16 -0.55 1.73 -0.03 2.11 -0.5 -0.51 -0.94 0.83 -0.6 -0.88 -0.36 -0.55 -0.0 0.17
-0.86 -1.08 -1.04 -0.69 -0.38 0.3 0.07 0.07 -0.16 0.58 -0.31 0.02 -0.69 -1.31 -0.69 -0.73 -0.56 -0.36 -0.22 0.97 0.06 2.07 -0.55 -0.75 -0.79 0.22 0.85 0.82 -0.37 -0.44 -0.24 -0.24
0.12 0.47 0.14 0.11 -0.13 -0.04 0.04 0.04 0.13 0.02 0.14 -0.01 -0.48 -2.23 -1.0 -0.61 -0.23 -0.16 -0.09 0.9 -2.99 1.61 -0.11 -0.15 -3.11 0.67 -0.15 0.36 -0.2 -0.18 -0.17 0.04
-1.0 -1.1 -1.56 -0.58 0.12 0.23 0.23 0.28 0.18 -0.12 -0.15 -0.56 -1.34 -1.21 0.15 -0.48 -0.39 -0.51 -0.66 1.56 0.93 2.12 -0.7 -0.86 -1.49 -1.17 0.12 0.44 -0.39 -0.34 -0.06 -0.19
0.26 0.43 0.57 0.41 0.61 0.29 0.29 -0.71 0.77 -0.22 0.41 0.14 -2.47 -5.16 -1.63 -1.69 0.11 -1.21 -1.82 2.83 -3.01 1.91 -3.93 -5.61 0.25 -3.28 -2.05 -3.44 -1.41 -0.81 -1.07 -1.59
-0.01 0.14 -0.16 -0.02 0.18 -0.03 -0.09 0.04 0.2 0.25 0.12 0.08 -0.4 -0.8 -0.23 0.21 -0.36 -0.29 -0.18 0.17 -0.01 1.52 -0.21 0.07 -0.6 0.26 -0.14 -0.11 -0.23 -0.17 -0.53 -0.64
-0.86 -0.49 -1.07 -0.42 0.4 0.52 0.24 0.58 -0.06 -0.46 -0.15 -0.66 -1.65 -1.2 0.61 -1.17 -1.39 -2.04 -1.15 1.14 0.16 2.11 -0.77 -0.81 -0.32 0.51 0.69 1.23 -0.52 -0.61 -1.29 -1.64
-1.04 -1.1 -1.52 -1.08 0.07 0.38 0.85 0.7 0.72 0.51 -0.31 -0.54 -2.9 -3.13 -1.35 -2.48 -1.09 -0.61 -1.35 1.64 0.83 2.43 -1.44 -2.06 -0.63 -0.34 0.6 0.48 -0.67 -0.86 -0.61 -1.02
-0.31 0.09 0.32 0.06 0.02 0.45 0.13 0.09 -0.01 -0.09 0.01 -0.16 -0.44 -0.74 0.3 0.09 -0.05 -0.56 0.22 0.38 0.21 1.09 -0.06 -0.09 -0.06 -0.76 -0.7 -0.3 -0.14 -0.03 -0.23 -0.27
-0.22 -0.05 -0.1 -0.19 -0.2 -0.06 -0.13 -0.34 -0.25 -0.0 -0.14 -0.31 -0.16 -0.22 -0.21 -0.05 -1.19 -2.25 -0.14 1.96 0.7 2.03 -0.85 -0.61 -0.48 -0.22 -0.3 -0.36 -0.78 -0.68 -1.08 -1.02
0.48 -0.33 0.49 0.08 -0.26 0.31 0.24 0.06 0.27 -0.03 0.09 -0.31 -1.9 -1.0 -0.13 -1.7 -1.76 0.28 -1.92 0.85 1.16 1.55 -1.37 -1.14 -0.01 0.88 0.47 0.93 -1.35 -1.24 -2.15 -1.92
0.0 0.13 -0.1 0.42 0.66 0.13 0.21 0.38 0.56 -0.34 0.23 0.06 -0.45 -0.25 0.13 0.18 -1.27 -4.65 -0.72 -0.19 -2.29 1.36 -0.1 -0.04 -1.53 0.75 0.91 0.63 -1.22 -1.45 -0.58 -0.53
0.06 -0.14 0.04 0.0 -0.13 0.04 -0.09 0.07 0.28 0.61 0.31 0.18 -0.07 -0.59 -0.37 0.49 -1.06 -0.9 -0.65 0.44 0.63 1.58 -0.4 -0.08 -0.47 0.46 -0.56 -0.46 -0.63 -0.66 -0.79 -0.85
-0.37 -0.71 -0.5 -0.53 -0.29 -0.19 -0.09 0.05 0.17 -0.12 0.04 -0.32 -2.3 -1.16 -1.21 -1.97 0.27 0.49 -0.88 0.71 0.73 1.78 -0.67 -0.84 0.72 -0.16 0.42 0.28 -0.04 -0.05 -0.02 0.3
0.18 0.16 0.23 0.03 0.15 0.15 -0.03 0.01 0.4 0.19 0.17 0.06 -1.44 -0.66 0.47 -0.24 -0.31 -1.0 1.3 0.36 -1.55 0.54 -0.58 -0.77 0.38 0.11 0.11 -0.01 -0.55 -0.27 -0.5 -0.5
0.15 0.29 -0.14 0.08 -0.18 0.16 0.01 0.09 0.49 0.39 0.26 0.42 -2.1 -0.34 0.19 -0.23 -0.44 -2.35 -0.36 0.72 0.5 1.59 -1.44 -1.11 1.1 0.06 -0.06 -1.34 -0.83 -0.51 -1.02 -1.06
0.17 0.17 -0.12 0.1 0.26 0.03 0.03 0.06 0.36 0.23 0.34 0.13 -0.12 -0.91 -0.44 -0.15 -0.52 -0.09 -0.18 1.01 -0.57 1.21 0.08 0.29 -0.76 -0.28 -0.35 -0.66 -0.47 -0.32 -0.51 -0.42
-0.81 -0.37 0.14 -0.07 0.24 -0.19 -0.26 -0.36 -0.18 -0.22 -0.67 -0.6 -1.03 -0.32 0.12 -0.98 -0.34 -1.95 0.65 -0.06 0.54 2.03 -0.7 -0.94 1.05 0.4 0.55 0.79 -0.32 -0.12 -1.95 -2.35
-0.22 0.12 0.28 0.17 -0.04 -0.02 0.22 0.34 0.52 0.39 0.4 0.24 0.55 -0.61 -1.53 0.59 -0.62 -1.42 -0.24 1.16 -1.08 0.76 -0.14 0.0 -0.3 -0.58 -0.62 -0.85 -0.48 -0.37 -0.24 -0.14
-0.99 -0.62 -0.89 0.47 -1.07 0.06 -1.49 -0.41 -1.39 0.07 -0.35 -0.37 0.73 -0.73 -0.89 0.54 -0.84 -2.97 0.07 1.78 -0.37 1.54 0.06 0.15 1.21 0.2 0.3 -0.71 -0.69 -0.72 -0.4 -0.35
-0.21 -1.01 - -0.86 - 0.57 0.84 1.14 1.47 0.53 -0.07 0.47 - - - -1.66 - - - 2.63 - 2.63 - -0.88 0.5 -0.64 - 1.07 -1.52 -1.8 - -
0.39 0.11 0.72 0.38 0.42 0.55 0.92 -0.26 0.75 0.28 0.36 -0.07 -0.81 -0.02 0.63 -1.52 -1.71 -5.02 -1.19 0.74 -0.41 1.44 -1.45 -1.26 -0.36 0.96 0.42 0.09 -2.86 -1.77 -2.38 -3.45
0.09 0.11 -0.19 0.33 -0.02 0.64 0.67 0.18 0.26 0.46 -0.18 -0.22 -0.41 -1.32 -0.17 -0.12 -0.91 -1.23 0.46 -1.16 -0.34 2.43 -0.99 -0.38 -0.57 -0.22 -0.76 0.11 -0.81 -0.65 -1.8 -2.1
-0.39 0.67 0.15 0.05 0.73 0.35 -0.19 -0.69 0.03 -0.05 0.04 -0.35 -0.93 -1.12 -1.43 -0.62 -0.89 -1.22 -0.36 0.85 1.65 2.36 -1.07 -2.55 -1.67 -0.66 -0.09 0.23 -1.41 -0.24 -1.86 -2.14
-0.63 -0.06 0.35 0.36 0.14 0.5 0.4 0.35 0.33 0.34 0.1 -0.14 -1.72 -1.62 -0.12 -1.18 -0.48 -3.42 -0.5 0.57 -0.21 2.07 -1.17 -1.26 0.48 1.06 -0.27 -0.72 -0.84 -0.76 -0.67 -0.67
-0.21 -0.65 -1.17 -1.87 -0.73 -0.87 -1.17 -0.88 -0.11 0.31 0.27 -0.16 -0.31 -0.62 -0.76 0.65 -0.28 -0.57 0.88 0.48 1.39 0.68 -1.71 -2.52 -2.95 -0.18 -3.02 -1.72 0.81 0.68 1.53 1.4
-0.16 -0.19 -0.26 -0.19 0.01 0.53 0.13 0.11 0.26 -0.15 -0.54 -0.36 -0.38 -0.77 0.32 -0.45 -1.06 -2.14 0.45 1.5 -0.12 1.91 -0.9 -0.31 -1.14 -0.79 0.17 0.2 -1.18 -0.65 -0.33 -0.15
0.23 0.01 -0.08 0.02 -0.03 0.43 0.14 0.18 0.29 0.12 -0.07 0.05 -2.85 -1.53 -0.52 -3.22 -1.22 -0.58 0.29 0.78 0.73 2.01 -1.3 -1.43 0.41 0.49 0.57 0.48 -0.97 -0.91 -1.66 -2.21
-4.01 -4.04 -4.24 -4.34 - -3.77 - -1.16 -3.91 -3.22 - -1.11 - - - - -3.81 - -1.96 3.71 - 4.02 -3.67 - -1.76 -2.71 - - -2.86 -2.8 -2.83 -3.91
-0.67 -1.05 -1.0 -0.71 -0.46 0.09 0.64 0.74 0.95 0.69 0.3 -0.2 -1.71 -3.13 -0.3 -1.04 -1.31 -0.43 -0.63 0.24 0.29 2.55 -1.33 -1.05 -3.54 0.08 0.34 0.61 -0.61 -0.64 -0.75 -0.68
0.13 -0.08 -0.63 -0.34 -0.05 -0.3 -0.24 -0.02 -0.19 -0.2 -0.17 -0.08 -0.52 -0.35 -0.74 0.1 -0.17 -0.03 0.28 0.33 0.32 0.3 -0.26 -0.1 -0.3 0.41 0.05 0.02 -0.04 0.07 0.97 0.52
0.07 0.24 0.51 0.71 1.33 0.35 0.32 -0.03 -0.17 -0.0 0.24 0.06 -0.93 -1.45 0.31 0.23 -0.21 -1.2 -0.57 -6.53 -1.14 2.12 0.29 0.23 -0.63 -0.67 -1.58 -0.36 -1.46 -0.58 -1.42 -1.6
0.59 0.96 1.43 -0.18 -1.06 0.41 -0.12 0.89 0.64 0.45 0.46 -0.08 -4.44 -0.69 -0.28 - -5.45 -5.49 -3.99 0.56 0.78 -0.43 -5.62 -2.97 0.9 0.72 1.28 1.73 -5.68 -3.57 -4.01 -4.07
-3.45 -2.59 -4.16 -2.35 -0.66 -0.13 -0.38 -0.09 -0.18 -1.62 -2.07 -2.55 0.16 -4.56 -0.85 -1.86 -1.41 -2.54 -3.25 2.11 0.35 2.99 -1.58 -4.49 -0.01 -0.05 1.91 1.61 -1.49 -1.79 -1.57 -1.45
-0.35 0.23 -0.78 0.26 -0.03 -0.38 -0.64 -0.51 -0.36 -0.14 -0.75 -0.57 -0.89 0.24 -0.18 -0.07 -1.96 -1.22 1.52 1.31 - 1.64 -1.1 -0.62 0.96 1.02 0.41 0.88 -1.73 -2.12 -1.4 -1.58
-0.36 -0.1 -0.4 -0.74 0.33 -0.26 -0.66 -0.58 -0.63 -1.19 -0.07 -0.07 0.2 -0.44 1.49 0.45 -0.93 -0.93 -0.15 1.07 -0.82 2.61 -2.31 -2.23 0.48 0.45 -0.44 -0.54 -1.47 -1.07 -2.61 -2.79
-0.43 -0.15 -0.65 -0.39 -0.59 -0.24 0.09 0.06 0.2 0.37 0.08 0.15 -0.29 -1.65 -1.79 -0.54 -0.39 0.23 -0.62 0.49 1.27 -3.67 0.6 0.42 0.05 -0.77 -1.43 -1.12 0.07 0.11 1.23 1.25
-0.1 0.42 0.23 0.48 1.56 0.75 0.81 1.1 1.24 0.53 1.21 0.39 - 0.33 -0.86 - - - -4.28 -2.94 -2.05 2.84 - -5.24 -1.47 -1.39 -0.53 -2.15 - -3.03 - -
-0.19 0.2 0.12 0.4 0.27 0.32 -0.26 -0.05 0.38 0.75 0.18 0.56 -1.87 -0.74 1.0 -0.96 -0.85 -5.13 -2.05 1.93 -1.04 1.86 -1.19 -1.35 0.6 0.16 -0.66 -1.41 -2.23 -1.56 -1.96 -1.63
0.01 -0.3 0.41 -0.02 0.92 -0.17 0.5 0.56 0.07 -0.05 0.64 -0.27 -2.55 -1.81 0.17 -2.0 -0.66 0.26 0.2 2.12 -2.82 0.93 -0.76 -1.52 -1.5 -0.42 0.14 0.34 -1.04 -0.35 -1.06 -1.29
-0.34 0.2 0.61 -0.26 0.46 -0.09 0.14 -0.12 -0.58 -0.45 -0.77 -0.58 -1.03 -1.93 1.1 -0.41 0.44 -0.36 -0.07 1.69 -1.75 1.54 0.99 0.06 -2.17 -2.94 -0.63 0.31 -0.56 -0.05 -1.79 -1.67
-0.55 0.03 -0.11 -0.42 -1.01 -0.47 -0.07 -0.96 0.38 0.23 0.5 -0.22 -0.47 -0.42 1.25 0.45 -0.24 0.3 -0.12 1.42 0.31 1.44 0.44 -0.65 -0.83 -1.33 -1.06 -0.27 -0.5 -0.21 -2.33 -1.63
-0.33 -0.81 -0.53 -0.41 -0.8 -0.41 -0.69 -0.53 -0.49 0.33 0.17 -0.03 -0.08 -0.73 -0.03 0.01 0.29 -0.37 0.51 0.35 0.12 -0.1 -0.01 -0.02 0.44 -0.76 -0.58 -0.62 0.2 0.28 1.09 1.31
-0.06 0.08 0.42 0.35 0.44 0.25 0.38 0.27 0.57 0.48 0.27 0.16 -1.66 -1.44 -1.28 -1.54 -0.33 -1.79 -0.5 -0.17 0.07 2.37 -1.05 -1.0 -1.72 0.36 0.03 0.12 -0.65 -0.56 -1.3 -1.39
0.09 0.0 -0.19 -0.1 0.05 0.1 -0.09 0.13 0.15 0.1 0.22 -0.03 -0.52 -1.2 -0.22 -0.62 -1.19 -0.78 -0.18 1.22 0.31 1.84 -0.87 -0.7 0.23 0.24 0.22 -0.3 -1.03 -1.24 -0.55 -0.18
0.2 0.19 0.04 -0.03 -0.05 0.04 -0.2 0.13 0.19 -0.0 0.36 0.26 -0.75 0.2 0.69 -0.23 -0.51 -0.48 -0.34 0.83 -0.75 1.89 -0.4 -0.25 -0.29 -0.35 -0.87 -0.84 -0.71 -0.55 -0.9 -1.02
-0.07 -0.16 -0.26 -0.05 -0.02 0.19 0.18 0.24 0.5 0.37 0.31 0.25 -0.29 0.09 0.62 -0.18 -0.53 -1.1 -0.22 0.05 -0.23 1.37 -0.36 -0.35 -1.4 0.52 0.11 -0.09 -0.56 -0.44 -0.79 -0.76
-0.18 -0.09 0.08 -0.07 0.07 -0.05 0.21 0.05 0.07 0.21 0.27 0.17 -0.27 0.23 0.32 -0.39 -0.69 -1.39 -0.76 1.15 -1.66 1.62 -0.41 -0.41 0.75 -0.08 -0.38 -0.22 -0.79 -0.5 -0.72 -0.85
-1.03 -0.68 -0.69 -0.14 -0.34 0.14 0.36 0.74 0.22 -0.63 -0.32 -0.32 -0.3 -1.27 0.43 -0.66 -1.15 -0.34 -0.23 0.89 -0.65 2.81 -0.66 -0.61 -0.84 -0.19 -0.43 -0.4 -0.97 -1.02 -1.12 -0.71
0.22 0.08 -0.21 -0.01 -0.08 -0.06 -0.25 0.11 0.22 0.12 0.1 0.15 0.14 0.38 -0.14 0.37 -0.74 -0.63 0.27 0.33 0.4 0.86 -0.17 -0.11 -0.81 -0.13 -0.82 -0.73 -0.28 -0.29 0.0 0.14
-0.51 -1.73 -2.45 -3.07 0.05 0.24 0.35 1.01 -0.31 -0.29 -0.67 -1.88 -2.07 -0.89 -1.61 -0.49 -0.07 0.02 -0.27 1.65 - 2.11 -0.58 -0.51 - -1.21 0.74 0.81 0.75 0.49 0.42 -0.13
-0.61 -0.5 -0.36 0.15 0.2 0.65 0.4 0.19 0.05 0.03 -0.17 -0.37 -0.06 0.18 -0.22 -0.07 -0.91 -1.03 -0.28 0.47 1.19 1.31 -0.32 -0.24 0.07 -0.7 0.13 0.07 -0.8 -0.76 -0.69 -0.51
-0.13 -0.14 0.34 -0.04 -0.05 0.02 -0.05 0.17 0.11 0.42 0.26 0.25 -0.42 -1.61 -1.69 -0.13 -0.75 -0.68 -0.54 1.67 0.46 2.2 -0.45 -0.28 -0.66 -0.8 -1.91 -1.87 -0.49 -0.57 -0.94 -0.99
0.05 -0.32 -0.25 -0.23 -0.32 -0.05 0.05 0.0 0.09 0.16 0.2 -0.11 -0.2 0.39 1.02 -0.12 -0.47 -0.02 0.15 0.56 -0.2 0.99 -0.13 0.05 -0.77 0.01 -0.52 -0.54 -0.31 -0.47 -0.49 -0.05
0.87 0.43 0.16 -0.02 -0.18 -0.24 -0.18 -0.75 -0.19 -0.13 0.08 0.74 -1.02 -1.38 0.22 -0.17 -0.33 -1.1 -0.21 1.15 -1.81 1.19 -0.46 -0.63 -0.28 0.97 -0.48 -0.24 -0.16 -0.02 -0.16 -0.58
-0.61 -0.57 -0.82 -0.22 -0.18 0.03 0.15 0.36 0.36 0.35 0.2 -0.15 -0.59 -0.2 1.19 -0.95 -1.41 -1.99 -1.03 0.99 -0.21 2.34 -1.0 -0.9 -1.2 -0.0 0.5 0.43 -1.27 -1.14 -1.35 -1.03
-0.92 -1.86 -1.47 -0.93 0.18 0.89 0.98 0.92 0.52 0.56 -0.1 -0.34 -2.15 -1.47 -0.04 -0.93 -1.21 -0.81 -1.87 1.45 0.5 2.19 -1.22 -1.36 -1.64 -1.49 0.16 0.46 -0.44 -0.28 -0.42 -1.06
-0.05 -0.04 -0.2 -0.32 -0.27 -0.29 -0.64 -0.46 -0.09 -0.26 -0.29 -0.35 -0.2 1.0 0.79 0.21 -0.14 -0.1 0.5 0.62 -0.46 1.11 0.36 0.23 0.28 -0.61 -0.74 -0.8 -0.25 -0.24 -0.61 -0.46
0.06 -0.18 -0.46 -0.07 -0.29 -0.01 -0.34 -0.21 -0.02 0.17 0.21 0.11 0.02 -0.8 -0.25 0.08 -0.54 -0.72 -0.03 0.62 0.75 1.78 0.05 0.1 0.43 -0.77 -1.16 -1.09 -0.57 -0.41 -0.19 -0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.