1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00013p00180110

AMTR_s00013p00180110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.106

Description : Nucleotide metabolism.deoxynucleotide metabolism.deoxycytidylate deaminase


Gene families : OG0006619 (Archaeplastida) Phylogenetic Tree(s): OG0006619_tree ,
OG_05_0009251 (LandPlants) Phylogenetic Tree(s): OG_05_0009251_tree ,
OG_06_0011230 (SeedPlants) Phylogenetic Tree(s): OG_06_0011230_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00180110
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001590.5 No alias Nucleotide metabolism.deoxynucleotide... 0.04 Archaeplastida
LOC_Os01g55974.1 No alias dCMP deaminase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002125 CMP_dCMP_dom 60 175
No external refs found!