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  5. Smo143476

Smo143476


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor


Gene families : OG0002554 (Archaeplastida) Phylogenetic Tree(s): OG0002554_tree ,
OG_05_0003007 (LandPlants) Phylogenetic Tree(s): OG_05_0003007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo143476
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Cre01.g051400 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01021057001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
LOC_Os11g28340.1 No alias ERD2 COPI trafficking K/HDEL-signature receptor 0.03 Archaeplastida
MA_118868g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032183_P001 No alias ERD2 COPI trafficking K/HDEL-signature receptor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046923 ER retention sequence binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 171
No external refs found!