Smo148346


Description : Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica


Gene families : OG0000702 (Archaeplastida) Phylogenetic Tree(s): OG0000702_tree ,
OG_05_0000468 (LandPlants) Phylogenetic Tree(s): OG_05_0000468_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo148346
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Zm00001e035881_P003 No alias Ricin B-like lectin R40G2 OS=Oryza sativa subsp.... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!