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  5. Smo148446

Smo148446


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS7 component


Gene families : OG0002388 (Archaeplastida) Phylogenetic Tree(s): OG0002388_tree ,
OG_05_0002780 (LandPlants) Phylogenetic Tree(s): OG_05_0002780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo148446
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00257730 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
AMTR_s00056p00135710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT3G02560 No alias Ribosomal protein S7e family protein 0.15 Archaeplastida
AT5G16130 No alias Ribosomal protein S7e family protein 0.13 Archaeplastida
Cpa|evm.model.tig00021682.9 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Cre12.g498900 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01008307001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
GSVIVT01031018001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Gb_33823 No alias component RPS7 of SSU proteome 0.05 Archaeplastida
LOC_Os03g18570.1 No alias component RPS7 of SSU proteome 0.13 Archaeplastida
LOC_Os03g18580.1 No alias component RPS7 of SSU proteome 0.11 Archaeplastida
LOC_Os05g27940.1 No alias component RPS7 of SSU proteome 0.04 Archaeplastida
MA_52277g0010 No alias component RPS7 of SSU proteome 0.05 Archaeplastida
Mp6g08120.1 No alias component RPS7 of SSU proteome 0.17 Archaeplastida
Pp3c20_1360V3.1 No alias Ribosomal protein S7e family protein 0.14 Archaeplastida
Pp3c23_18280V3.1 No alias Ribosomal protein S7e family protein 0.12 Archaeplastida
Pp3c24_18220V3.1 No alias Ribosomal protein S7e family protein 0.15 Archaeplastida
Pp3c8_22480V3.1 No alias Ribosomal protein S7e family protein 0.1 Archaeplastida
Solyc03g119360.3.1 No alias component RPS7 of SSU proteome 0.17 Archaeplastida
Solyc06g069090.3.1 No alias component RPS7 of SSU proteome 0.16 Archaeplastida
Zm00001e001349_P002 No alias component RPS7 of SSU proteome 0.12 Archaeplastida
Zm00001e038391_P004 No alias component RPS7 of SSU proteome 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000554 Ribosomal_S7e 6 186
No external refs found!