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  5. Smo152929

Smo152929


Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component


Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0002814 (LandPlants) Phylogenetic Tree(s): OG_05_0002814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo152929
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00232760 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.04 Archaeplastida
AMTR_s00006p00260320 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
AMTR_s00010p00262450 evm_27.TU.AmTr_v1... ATP-dependent zinc metalloprotease FTSH 6, chloroplastic... 0.02 Archaeplastida
AMTR_s00021p00235220 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
AMTR_s00056p00047160 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.05 Archaeplastida
AMTR_s00106p00108310 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.06 Archaeplastida
AT1G50250 FTSH1 FTSH protease 1 0.03 Archaeplastida
AT3G02450 No alias cell division protein ftsH, putative 0.07 Archaeplastida
AT3G16290 EMB2083 AAA-type ATPase family protein 0.03 Archaeplastida
AT4G23940 No alias FtsH extracellular protease family 0.04 Archaeplastida
AT5G15250 ATFTSH6, FTSH6 FTSH protease 6 0.02 Archaeplastida
AT5G42270 FTSH5, VAR1 FtsH extracellular protease family 0.03 Archaeplastida
Cpa|evm.model.tig00021127.121 No alias ATP-dependent zinc metalloprotease FTSH 5, chloroplastic... 0.02 Archaeplastida
Cpa|evm.model.tig00022075.42 No alias ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.01 Archaeplastida
Cre03.g201100 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.01 Archaeplastida
Cre07.g352350 No alias ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.01 Archaeplastida
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
GSVIVT01019239001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.04 Archaeplastida
GSVIVT01020760001 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
GSVIVT01036484001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
Gb_32360 No alias component FtsHi of protein translocation ATPase motor complex 0.03 Archaeplastida
LOC_Os06g45820.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida
LOC_Os06g51029.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 Archaeplastida
MA_10435856g0010 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.06 Archaeplastida
MA_188257g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_793260g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_98203g0010 No alias No annotation 0.02 Archaeplastida
Mp4g19200.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 Archaeplastida
Mp6g01370.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.05 Archaeplastida
Mp6g15080.1 No alias component FtsHi of protein translocation ATPase motor complex 0.05 Archaeplastida
Pp3c12_22830V3.1 No alias FtsH extracellular protease family 0.02 Archaeplastida
Pp3c17_20370V3.1 No alias AAA-type ATPase family protein 0.04 Archaeplastida
Pp3c20_15780V3.1 No alias FtsH extracellular protease family 0.05 Archaeplastida
Pp3c22_8480V3.1 No alias FtsH extracellular protease family 0.03 Archaeplastida
Pp3c23_14665V3.1 No alias FtsH extracellular protease family 0.02 Archaeplastida
Solyc03g046340.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.03 Archaeplastida
Solyc04g082250.3.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 Archaeplastida
Solyc07g055320.4.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida
Solyc08g082530.4.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.06 Archaeplastida
Solyc12g044400.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.02 Archaeplastida
Zm00001e007868_P001 No alias component FtsHi of protein translocation ATPase motor complex 0.07 Archaeplastida
Zm00001e030153_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 Archaeplastida
Zm00001e030358_P003 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 Archaeplastida
Zm00001e037753_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0032039 integrator complex IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 169 300
No external refs found!