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  5. Smo153225

Smo153225


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS19 component


Gene families : OG0002393 (Archaeplastida) Phylogenetic Tree(s): OG0002393_tree ,
OG_05_0002411 (LandPlants) Phylogenetic Tree(s): OG_05_0002411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo153225
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00207750 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
AMTR_s00110p00069670 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 Archaeplastida
AT3G02080 No alias Ribosomal protein S19e family protein 0.16 Archaeplastida
AT5G15520 No alias Ribosomal protein S19e family protein 0.09 Archaeplastida
AT5G61170 No alias Ribosomal protein S19e family protein 0.29 Archaeplastida
Cpa|evm.model.tig00021017.6 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
Cre02.g106600 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.32 Archaeplastida
GSVIVT01007908001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
GSVIVT01012199001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.28 Archaeplastida
Gb_40460 No alias component RPS19 of SSU proteome 0.15 Archaeplastida
LOC_Os03g31090.1 No alias component RPS19 of SSU proteome 0.24 Archaeplastida
MA_10427917g0010 No alias component RPS19 of SSU proteome 0.28 Archaeplastida
MA_7685779g0010 No alias component RPS19 of SSU proteome 0.03 Archaeplastida
MA_9301411g0010 No alias component RPS19 of SSU proteome 0.16 Archaeplastida
Mp1g27380.1 No alias component RPS19 of SSU proteome 0.27 Archaeplastida
Pp3c14_19640V3.1 No alias Ribosomal protein S19e family protein 0.21 Archaeplastida
Pp3c17_15200V3.1 No alias Ribosomal protein S19e family protein 0.16 Archaeplastida
Pp3c1_28780V3.1 No alias Ribosomal protein S19e family protein 0.3 Archaeplastida
Pp3c27_2780V3.1 No alias Ribosomal protein S19e family protein 0.02 Archaeplastida
Pp3c2_10060V3.1 No alias Ribosomal protein S19e family protein 0.29 Archaeplastida
Solyc03g115360.3.1 No alias component RPS19 of SSU proteome 0.22 Archaeplastida
Solyc12g039120.2.1 No alias component RPS19 of SSU proteome 0.22 Archaeplastida
Zm00001e002011_P001 No alias component RPS19 of SSU proteome 0.23 Archaeplastida
Zm00001e038053_P003 No alias component RPS19 of SSU proteome 0.26 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 7 141
No external refs found!