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  5. Smo154355

Smo154355


Description : ABC transporter F family member 1 OS=Arabidopsis thaliana


Gene families : OG0001462 (Archaeplastida) Phylogenetic Tree(s): OG0001462_tree ,
OG_05_0003606 (LandPlants) Phylogenetic Tree(s): OG_05_0003606_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo154355
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00176080 evm_27.TU.AmTr_v1... ABC transporter F family member 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT5G60790 ATGCN1, GCN1 ABC transporter family protein 0.02 Archaeplastida
Cpa|evm.model.tig00020629.98 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre11.g467781 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
MA_8312073g0010 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.02 Archaeplastida
Mp7g18200.1 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.03 Archaeplastida
Solyc11g069090.2.1 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e017809_P001 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e039565_P001 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045116 protein neddylation IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 403 533
No external refs found!