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  5. Smo157263

Smo157263


Description : 40S ribosomal protein S9-2 OS=Arabidopsis thaliana


Gene families : OG0001616 (Archaeplastida) Phylogenetic Tree(s): OG0001616_tree ,
OG_05_0001469 (LandPlants) Phylogenetic Tree(s): OG_05_0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo157263
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT5G15200 No alias Ribosomal protein S4 0.19 Archaeplastida
Cre08.g359750 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.09 Archaeplastida
GSVIVT01008028001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.09 Archaeplastida
GSVIVT01011384001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.1 Archaeplastida
GSVIVT01020020001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_41315 No alias component RPS9 of SSU proteome 0.06 Archaeplastida
LOC_Os03g05980.1 No alias component RPS9 of SSU proteome 0.14 Archaeplastida
LOC_Os11g38959.1 No alias component RPS9 of SSU proteome 0.16 Archaeplastida
MA_10429805g0030 No alias component RPS9 of SSU proteome 0.05 Archaeplastida
MA_10431745g0020 No alias component RPS9 of SSU proteome 0.07 Archaeplastida
Mp3g00520.1 No alias component RPS9 of SSU proteome 0.17 Archaeplastida
Mp6g10930.1 No alias component RPS9 of SSU proteome 0.17 Archaeplastida
Pp3c12_9190V3.1 No alias Ribosomal protein S4 0.06 Archaeplastida
Pp3c13_19780V3.1 No alias Ribosomal protein S4 0.12 Archaeplastida
Pp3c3_23720V3.1 No alias Ribosomal protein S4 0.11 Archaeplastida
Pp3c4_15290V3.1 No alias Ribosomal protein S4 0.14 Archaeplastida
Pp3c6_17680V3.1 No alias Ribosomal protein S4 0.05 Archaeplastida
Solyc01g010540.3.1 No alias component RPS9 of SSU proteome 0.17 Archaeplastida
Solyc01g010580.3.1 No alias component RPS9 of SSU proteome 0.07 Archaeplastida
Solyc04g005680.4.1 No alias component RPS9 of SSU proteome 0.15 Archaeplastida
Solyc05g007250.3.1 No alias component RPS9 of SSU proteome 0.22 Archaeplastida
Zm00001e010819_P002 No alias component RPS9 of SSU proteome 0.16 Archaeplastida
Zm00001e018345_P001 No alias component RPS9 of SSU proteome 0.1 Archaeplastida
Zm00001e037961_P002 No alias component RPS9 of SSU proteome 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001912 Ribosomal_S4/S9_N 12 64
No external refs found!