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  5. Smo159042

Smo159042


Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL27 component


Gene families : OG0001767 (Archaeplastida) Phylogenetic Tree(s): OG0001767_tree ,
OG_05_0007646 (LandPlants) Phylogenetic Tree(s): OG_05_0007646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo159042
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00039290 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 Archaeplastida
AT5G15220 No alias Ribosomal protein L27 family protein 0.02 Archaeplastida
AT5G40950 RPL27 ribosomal protein large subunit 27 0.07 Archaeplastida
Cpa|evm.model.tig00022075.47 No alias 50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea 0.02 Archaeplastida
Cre06.g300800 No alias 50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01033086001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Gb_27573 No alias component psRPL27 of large ribosomal subunit proteome 0.04 Archaeplastida
LOC_Os01g69950.1 No alias component psRPL27 of large ribosomal subunit proteome 0.06 Archaeplastida
MA_19490g0010 No alias component psRPL27 of large ribosomal subunit proteome 0.06 Archaeplastida
Mp5g06170.1 No alias component psRPL27 of large ribosomal subunit proteome 0.1 Archaeplastida
Pp3c18_9840V3.1 No alias ribosomal protein large subunit 27 0.08 Archaeplastida
Pp3c21_16170V3.1 No alias ribosomal protein large subunit 27 0.07 Archaeplastida
Solyc11g068820.3.1 No alias component psRPL27 of large ribosomal subunit proteome 0.08 Archaeplastida
Zm00001e028431_P003 No alias component psRPL27 of large ribosomal subunit proteome 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 45 124
No external refs found!